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Minima Hopping Guided Path Search: An Efficient Method for Finding Complex Chemical Reaction Pathways

机译:最小跳跃引导路径搜索:一种有效的查找方法   复杂化学反应途径

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摘要

The Minima Hopping global optimization method uses physically realizablemolecular dynamics moves in combination with an energy feedback that guaranteesthe escape from any potential energy funnel. For the purpose of findingreactions pathways, we argue that Minima Hopping is particularly suitable as aguide through the potential energy landscape and as a generator for pairs ofminima that can be used as input structures for methods capable of findingtransition states between two minima. For Lennard-Jones benchmark systems wecompared this Minima Hopping guided path search method to a known approach forthe exploration of potential energy landscapes that is based on deterministicmode-following. Although we used a stabilized mode-following technique thatreliably allows to follow distinct directions when escaping from a localminimum, we observed that Minima Hopping guided path search is far superior infinding lowest-barrier reaction pathways. We therefore suggest that MinimaHopping guided path search can be used as a simple and efficient way toidentify energetically low-lying chemical reaction pathways. Finally we appliedthe Minima Hopping guided path search approach to 75-atom and 102-atom LennardJones systems. For the 75-atom system we found pathways whose highest energiesare significantly lower than the highest energy along the previously publishedlowest-barrier pathway. Furthermore, many of these pathways contain a smallernumber of intermediate transition states than the previously publishlowest-barrier pathway. In case of the 102-atom system Minima Hopping guidedpath search found a previously unknown and energetically low-lying funnel.
机译:最小跳变全局优化方法使用物理上可实现的分子动力学运动与能量反馈相结合,以确保逃逸任何潜在的能量漏斗。出于寻找反应路径的目的,我们认为极小跳跃特别适合作为穿越势能态势的指南以及极小对的生成器,这些极小对可用作能够找到两个极小之间的过渡态的方法的输入结构。对于Lennard-Jones基准系统,我们将该“最小跳变”引导路径搜索方法与一种基于确定性模式跟踪的潜在能量景观探索方法进行了比较。尽管我们使用了稳定的模式跟随技术,当从局部最小值逃逸时,可以可靠地遵循不同的方向,但我们发现,最小跳变引导路径搜索在发现最低势垒反应路径方面要好得多。因此,我们建议将MinimaHopping引导路径搜索用作识别能量低的化学反应途径的简单有效的方法。最后,我们对75原子和102原子的LennardJones系统应用了最小跳变引导路径搜索方法。对于75原子系统,我们发现沿先前公布的最低势垒途径其最高能量明显低于最高能量的途径。此外,这些路径中的许多路径所包含的中间过渡状态的数量比以前发布的最低障碍路径的数量少。在102原子系统的情况下,Minima Hopping引导路径搜索发现了一个以前未知且能量低的漏斗。

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